PCDC Data Model

Schema IDhttps://models.d4cg.org/pcdc
Releasepcdc-portal
LicenseCC BY-NC 4.0
Concepts37 classes · 328 slots · 177 enums
Community ·
Scope Matrix
Domain Class AML GCT HL NBL NRSTS RMS
DemographicsExternalReference
DemographicsFamilyMedicalHistory
DemographicsMedicalHistory
DemographicsOffProtocolTherapyStudy
DemographicsPerson
DemographicsStudy
DemographicsSubject
DemographicsSurvivalCharacteristic
DemographicsTiming
Disease AttributesDiseaseCharacteristic
Disease AttributesHistology
Disease AttributesLesionCharacteristic
Disease AttributesMyeloidSarcomaInvolvement
Disease AttributesStaging
Disease AttributesTumorAssessment
InterventionBiopsySurgicalProcedure
InterventionCellularImmunotherapy
InterventionNonProtocolTherapy
InterventionProtocolTreatmentModifications
InterventionRadiationTherapy
InterventionStemCellTransplant
InterventionTotalDose
InterventionTransfusionMedicineProcedure
MonitoringAdverseEvent
MonitoringGrowingTeratomaSyndrome
MonitoringLateEffects
MonitoringMinimalResidualDisease
MonitoringSecondaryMalignantNeoplasm
MonitoringSubjectResponse
TestingBiospecimen
TestingCytology
TestingFunctionTest
TestingImaging
TestingImmunohistochemistry
TestingLab
TestingMolecularAnalysis
TestingVital
Rendered Raw
Demographics

Person 1..1

Diagram
SlotRangeSlot URIDescription
submitter_id
string
subjects_submitter_id
Subject
sex
ncit:C28421
An arbitrary categorization of individuals based on the assemblage of physical properties related to reproduction, and commonly associated with the designation of such categories as female and male. This designation is based on a combination of observable information from organ inventories, morphological assessments, hormone assessments, genetic testing, observed primary and secondary sex characteristics, menstrual status, and/or obstetric history. Current sex designation may or may not be the same as an individual's sex assigned or reported at birth. IMPORTANT NOTICE: The NCI Thesaurus contains biomedical terminologies that NCI does not own or control. This concept contains gender-related content that does not comply with Executive Order 14168.
race
ncit:C17049
A geographic ancestral origin category that is assigned to a population group based mainly on physical characteristics that are thought to be distinct and inherent.
ethnicity
ncit:C16564
A social group characterized by a distinctive social and cultural tradition that is maintained from generation to generation. Members share a common history and origin and a sense of identification with the group. They have similar and distinctive features in their lifestyle habits and shared experiences. They often have a common genetic heritage which may be reflected in their experience of health and disease.
Slot Icons:Required

Subject 1..1

SlotRangeSlot URIDescription
consortium
ncit:C61538
A group formed to undertake a venture that is beyond the capabilities of the individual members. Each member of the consortium brings a high level of expertise in a specific area to ensure the successful completion of the project.
submitter_id
string
honest_broker_subject_id
string
ncit:C168949
Subject identifier assigned by the honest broker.
data_contributor_id
ncit:C168950
An identifier assigned to a data contributor.
age_at_censor_status
integer
censor_status
Slot Icons:Required

ExternalReference 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
external_links
string
external_resource_icon_path
string
external_resource_id
string
external_resource_name
string
external_subject_id
string
external_subject_submitter_id
string
external_subject_url
string
Slot Icons:Required

Study 0..*

Diagram
SlotRangeSlot URIDescription
submitter_id
string
subjects_submitter_id
Subject
age_at_enrollment
integer
ncit:C168843
Age of subject (in days) when the subject enrolled in the study.
enrolled_status
ncit:C168928
The current status of the subject's enrollment.
study_id
ncit:C83082
A sequence of characters used to identify, name, or characterize the study.
treatment_arm
ncit:C15538
A group of participants in a research study who all receive the same study treatment. (https://mrctcenter.org/glossaryterm/arm/)
year_at_enrollment
integer
ncit:C177353
The year at which a subject enrolled in a study.
study_phase
ncit:C48281
A stage in the clinical research and development of a therapy from first-in-human to post-approval clinical trials.
study_type
ncit:C142175
The nature of the investigation for which study information is being collected. (After clinicaltrials.gov)
Slot Icons:Required

Timing 0..*

Diagram
SlotRangeSlot URIDescription
submitter_id
string
subjects_submitter_id
Subject
timing_type
disease_phase
ncit:C168878
The stage or period of an individual's disease.
disease_phase_number
integer
ncit:C173258
age_at_disease_phase
integer
ncit:C168972
year_at_disease_phase
integer
ncit:C168823
course
ncit:C168807
The type of protocol treatment course administered.
course_number
integer
ncit:C166235
age_at_course_start
integer
ncit:C168850
age_at_course_end
integer
ncit:C168851
age_at_course_anc_500
integer
ncit:C168852
Age of subject (in days) when their neutrophil count exceeded a threshold of 500 (ANC/mm3) during the course.
cycle_number
integer
ncit:C166208
The number of the individual chemotherapeutic cycle.
age_at_cycle_start
integer
ncit:C185317
age_at_cycle_end
integer
ncit:C185316
Slot Icons:Required

OffProtocolTherapyStudy 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_off
integer
ncit:C172678
off_type
ncit:C173256
The code used to designate that the subject went off therapy or off the study.
reason_off
ncit:C169005
another_study
ncit:C178073
The subject was enrolled in another therapeutic study after going off the previous study.
Slot Icons:Required

SurvivalCharacteristic 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_lkss
integer
ncit:C168844
Age of subject (in days) at the last known survival status.
lkss
ncit:C168931
The individual's last known survival status.
lkss_with_disease
ncit:C178074
The last know survival status of the individual with the disease.
age_lost_to_follow_up
integer
ncit:C172679
Age of subject (in days) when the subject was lost to follow-up.
cause_of_death
ncit:C81239
Cause of death for patient
cause_of_death_other
string
TRM_type
ncit:C173260
The type of treatment related to the mortality of the subject.
cause_of_death_detail
ncit:C168868
Specific details of the cause of death.
cause_of_death_ranking
ncit:C168932
Assigning a weighted relevance to the cause of death.
Slot Icons:Required

FamilyMedicalHistory 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
family_history
ncit:C17726
relative
ncit:C21480
A person related by blood or marriage.
prior_cancer
string
ncit:C185318
Slot Icons:Required

MedicalHistory 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
medical_history
ncit:C18772
A collection of information about a person's health. It may include information about allergies, illnesses and surgeries, and dates and results of physical exams, tests, screenings, and immunizations. It may also include information about medicines taken and about diet and exercise.
medical_history_status
medical_history_category
ncit:C83018
assisted_conception
Slot Icons:Required
Testing

Vital 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_vitals
integer
ncit:C168845
vitals_test
ncit:C49672
The act of assessing an individual's current temperature, heart rate, respiratory rate, pulse oxygenation, and blood pressure.
vitals_result
string
ncit:C173522
vitals_result_numeric
decimal
ncit:C173268
vitals_result_unit
ncit:C83161
Slot Icons:Required

FunctionTest 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at
integer
ncit:C185624
Age of subject (in days) at the time of the function test.
function_category
ncit:C185625
A grouping of items based on their function.
function_result
string
ncit:C162133
function_test
function_result_numeric
decimal
ncit:C185629
The result of a function test expressed as a number.
function_result_unit
ncit:C67415
Slot Icons:Required

Lab 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_lab
integer
ncit:C172691
Age of subject (in days) when the laboratory test was performed.
lab_cat
ncit:C83017
lab_test
ncit:C117142
A character or string that represents the full name of the laboratory assessment.
lab_spec_type
ncit:C83315
lab_seq_method
ncit:C49142
The number of molecules of a particular type on or in a cell or part of a cell. Usually applied to specific genes or to plasmids within a bacterium.
lab_result
string
ncit:C36292
The outcome of a laboratory test.
lab_result_numeric
decimal
ncit:C83320
lab_result_unit
ncit:C83106
lab_method
ncit:C83312
A systematic course of action that is performed in order to complete a laboratory test.
traumatic_tap
ncit:C168879
Contamination of a cerebrospinal fluid sample by red blood cells greater than 10/mm3.
pmid_ref
string
ncit:C127797
A globally unique identifier for a biomedical article, as assigned by PubMed.
threshold_high
decimal
ncit:C177365
The maximum level that must be exceeded for a certain reaction to occur or be manifested.
threshold_low
decimal
ncit:C177366
The minimum level that must be attained for a certain reaction to occur or be manifested.
Slot Icons:Required

MolecularAnalysis 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_molecular_analysis
integer
ncit:C168848
Age of subject (in days) when molecular analysis was performed.
molecular_analysis_method
ncit:C158954
A request to enter the specific molecular analysis method used to detect abnormalities in the study.
iscn
string
ncit:C173278
indepen_abb
decimal
ncit:C173279
The number of independent aberrations found in the karyotype during analysis.
num_metaphases
decimal
ncit:C168918
The number of cells in metaphase during karyotype analysis.
molecular_abnormality
ncit:C3910
A molecular or cytogenetic abnormality which occurs in either human disease states or disease models.
chromosome
string
ncit:C13202
A structural unit composed of a nucleic acid molecule which controls its own replication through the interaction of specific proteins at one or more origins of replication. [Sequence Ontology: SO:0000340 (SOWiki) http://www.sequenceontology.org/browser/current_svn/term/SO:0000340] EXAMPLE(S): Most humans have 23 pairs of chromosomes--22 pairs of numbered chromosomes, called autosomes, and one pair of sex chromosomes, X and Y. OTHER NAME(S): NOTE(S): This class can represent eukaryotic (e.g. human), mitochondrial, bacterial, and viral chromosomes, for example.
gene1
string
ncit:C173595
The gene symbol that represents either a single gene that has a mutation or the gene that comprises the 5' portion of the coding sequence involved in a fusion gene mutation.
gene2
string
ncit:C171253
The gene symbol that represents the gene that comprises the 3' portion of the coding sequence for a fusion gene.
variant_type
ncit:C97926
genetic_seq
string
ncit:C97927
aa_mutation
string
ncit:C97928
A variation in the sequence of a specific gene product.
molecular_abnormality_result
ncit:C173596
An indicator for whether a molecular analysis procedure was performed and whether the assay detected a molecular abnormality.
allelic_ratio
decimal
ncit:C173545
The determination of the ratio of variant alleles to wild-type alleles present in a sample.
anaplasia
anaplasia_extent
copy_number_status
cytodifferentiation
dna_index
dna_index_numeric
decimal
karyotype_status
ncit:C168871
The status of the subject's karyotype.
mitoses
num_chromosomes
decimal
ncit:C177370
The number of chromosomes upon karyotype analysis.
Slot Icons:Required

Biospecimen 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
biospecimen_container_type
string
biospecimen_media
string
biospecimen_type
string
current_qty_unit
string
current_qty_value
string
Slot Icons:Required

Immunohistochemistry 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_ihc
integer
ncit:C175006
Age of subject (in days) at immunohistochemistry assessment.
ihc_test
ncit:C51944
A diagnostic test in which an antibody is used to link a cellular antigen specifically to a stain that can be seen with a microscope.
ihc_result
string
ncit:C175007
ihc_result_numeric
decimal
ncit:C177368
Slot Icons:Required

Cytology 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_cytology
integer
ncit:C177369
malignant_cells
ncit:C51944
A diagnostic test in which an antibody is used to link a cellular antigen specifically to a stain that can be seen with a microscope.
cytology_spec_type
ncit:C70713
The type of a material sample taken from a biological entity for testing, diagnostic, propagation, treatment or research purposes. This includes particular types of cellular molecules, cells, tissues, organs, body fluids, embryos, and body excretory substances.
Slot Icons:Required

Imaging 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_imaging
integer
ncit:C185622
imaging_method
ncit:C17369
A method of producing pictures of areas inside the body.
imaging_result
ncit:C176708
The result of an evaluation technique using a visual display of structural or functional patterns of organs or tissues that is performed to determine the presence, absence, or degree of a condition.
deauville_score
ncit:C99723
A 5 point scale originally devised by Barrington et al. (2014) to assess the response to treatment of lymphoma by FDG-PET scanning, and has since been validated to assess treatment responses in a number of additional solid and non-solid tumors.
qpet_score
decimal
ncit:C185623
A methodology that provides semi-automatic quantification for interim FDG-PET response in lymphoma. It extends the ordinal Deauville score to a continuous scale.
Slot Icons:Required
Disease_Attributes

Histology 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_hist_assessment
integer
ncit:C175004
Age of subject (in days) at histology assessment.
hist_assessment_review
ncit:C177360
histology
ncit:C16681
histology_result
string
ncit:C166246
histology_result_numeric
decimal
ncit:C177361
histology_result_unit
ncit:C177362
hist_ICD_O_morph_code
string
ncit:C176985
histology_grade
ncit:C18000
A description of a tumor based on how abnormal the cancer cells look under a microscope and how quickly the tumor is likely to grow and spread. Grading systems are different for each type of cancer.
mature_glial_implants
ncit:C177363
A nodule of mature glial tissue that develops in the peritoneum. It is usually accompanied by mature or immature ovarian teratoma.
somatic_malignancy_type
ncit:C177364
A malignant non-germ cell component that typically develops secondarily within a germ cell tumor. The malignant cellular component is usually sarcomatous or carcinomatous.
histology_inpc
Slot Icons:Required

Staging 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_staging
integer
ncit:C177359
Age of subject (in days) at the time of the staging assessment.
AB
ncit:C181839
An indication whether A- or B-designations, based on the Ann Arbor lymphoma classification system guidelines, were used to modify staging classifications.
E
ncit:C177586
An indication of whether a record includes data regarding extranodal involvement based on the Ann Arbor lymphoma classification system guidelines.
S
ncit:C185484
An indication of whether a record includes data regarding splenic involvement based on the Ann Arbor lymphoma classification system guidelines.
stage_system
ncit:C18004
A systematic method for clinicopathologic evaluation of tumors.
stage
ncit:C16899
The extent of a cancer in the body.
irs_group
tnm_finding
Slot Icons:Required

DiseaseCharacteristic 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
fab_type
ncit:C91220
who_aml
ncit:C159157
disease_site
ncit:C173263
detection_method
ncit:C173262
The method used to detect the extent of the disease involvement.
CNS_disease_status
ncit:C173264
MPAL
ncit:C82179
An acute leukemia of ambiguous lineage. It is characterized by the presence of either separate populations of blasts of more than one lineage, or one population of blasts co-expressing markers of more than one lineage.
MLDS
ncit:C43223
Acute myeloid leukemia occurring in children with Down syndrome. During the first 3 years of life, it is usually the megakaryoblastic subtype, and is associated with GATA1 gene mutation. After age 4 this is no longer the case.
TAMDS
ncit:C82339
A myeloid proliferation occurring in newborns with Down syndrome. It is clinically and morphologically indistinguishable from acute myeloid leukemia and is associated with GATA1 mutations. The blasts display morphologic and immunophenotypic features of megakaryocytic lineage. In the majority of patients the myeloid proliferation undergoes spontaneous remission.
secondary_AML
ncit:C25765
An acute myeloid leukemia arising from prior myelodysplastic syndrome, myeloproliferative neoplasm, or myelodysplastic/myeloproliferative neoplasm, or as a result of previous exposure to alkylating agents or topoisomerase II inhibitors.
bulky_nodal_aggregate
BULK_MED_MASS
ncit:C178075
When the maximum width of a mass is equal or greater than one-third of the internal transverse diameter of the thorax at the level of T5/6 on a PA CXR. Bulk at an alternate site is defined as any mass measuring 10 cm or more by any imaging study.
bulk_disease
ncit:C38655
The presence of a large mass or matted lymph nodes in an imaging study. This term almost always refers to lymphomas and its definition depends on the histological type of lymphoma. Generally, a tumor mass measuring more than 7 cm or more than 10 cm in diameter is considered bulky disease.
fever
ncit:C3038
A disorder characterized by elevation of the body's temperature above the upper limit of normal.
igccc_risk_group
ncit:C111073
initial_treatment_category
karnofsky
ncit:C28013
lansky
ncit:C38144
magic_risk_group
ncit:C177316
med_ratio
decimal
ncit:C185323
A measurement of the width of the mediastinum divided by the width of the chest.
mki
night_sweats
ncit:C3279
Nocturnal perspiration that is unrelated to environmental temperature.
nodular_splenic
ncit:C185322
A finding indicating that Hodgkin lymphoma has spread to the spleen focally and there is associated involvement of the hilar lymph nodes.
weight_loss
ncit:C3445
histology_inpc
Slot Icons:Required

MyeloidSarcomaInvolvement 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
myeloid_sarcoma
ncit:C3520
A malignant neoplasm composed of myeloblasts or immature myeloid cells. It occurs in extramedullary sites or the bone.
myeloid_sarcoma_site
ncit:C168822
Slot Icons:Required

TumorAssessment 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_tumor_assessment
integer
ncit:C174997
Age of subject (in days) at tumor assessment.
necrosis
necrosis_pct
decimal
nodal_site
tumor_detection_method
ncit:C117438
tumor_classification
ncit:C174459
The classification of a tumor based primarily on histopathological characteristics.
tumor_site
ncit:C157120
The anatomic site of the tumor.
tumor_laterality
ncit:C119931
tumor_state
nodal_involvement
depth
invasiveness
longest_diam_dim1
decimal
ncit:C96684
The longest possible length of a straight line passing through the center of a circular or spheroid object that connects two points on the circumference.
longest_diam_dim2
decimal
ncit:C96684
The longest possible length of a straight line passing through the center of a circular or spheroid object that connects two points on the circumference.
longest_diam_dim3
decimal
ncit:C96684
The longest possible length of a straight line passing through the center of a circular or spheroid object that connects two points on the circumference.
nodal_clinical
nodal_pathology
parameningeal_extension
pleural_effusion
ncit:C3331
A disorder characterized by an increase in amounts of fluid within the pleural cavity. Symptoms include shortness of breath, cough and marked chest discomfort.
tumor_site_other
string
tumor_size
Slot Icons:Required

LesionCharacteristic 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_lesion_assessment
integer
ncit:C185485
lesion_assessment_review
ncit:C185324
The institution which has reviewed the lesion assessment.
lesion_detection_method
ncit:C173262
The method used to detect the extent of the disease involvement.
lesion_classification
ncit:C185489
lesion_site
ncit:C166232
Specifies the anatomic site of a localized pathological or traumatic structural change, damage, deformity, or discontinuity of tissue, organ, or body part.
e_extension_site
ncit:C185478
lesion_laterality
ncit:C185479
lesion_bulky
ncit:C185477
longest_diam_dim1
decimal
ncit:C96684
The longest possible length of a straight line passing through the center of a circular or spheroid object that connects two points on the circumference.
diam_dim1_type
ncit:C185494
longest_diam_dim2
decimal
ncit:C96684
The longest possible length of a straight line passing through the center of a circular or spheroid object that connects two points on the circumference.
diam_dim2_type
ncit:C185495
longest_diam_dim3
decimal
ncit:C96684
The longest possible length of a straight line passing through the center of a circular or spheroid object that connects two points on the circumference.
diam_dim3_type
ncit:C185496
pleural_effusion
ncit:C3331
A disorder characterized by an increase in amounts of fluid within the pleural cavity. Symptoms include shortness of breath, cough and marked chest discomfort.
pericardial_effusion
ncit:C3319
A disorder characterized by fluid collection within the pericardial sac, usually due to inflammation.
lesion_response
ncit:C94534
A qualitative or quantitative measurement of the response of a target lesion(s) to the therapy.
lesion_pct_change
decimal
ncit:C185497
The percentage of change in a particular lesion.
Slot Icons:Required
Intervention

BiopsySurgicalProcedure 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_procedure
integer
ncit:C175008
Age of subject (in days) at procedure.
procedure_performed
procedure_treatment_timing
procedure_site
ncit:C164323
procedure_laterality
procedure_type
ncit:C161601
A categorization of surgical procedures by type or purpose.
procedure_extent
ncit:C157443
A description of the relative amount of tissue, blood vessel, or organ that has been removed.
mass_present
viable_tumor_specimen
viable_tumor_margin
margins
ncit:C41227
One of the criteria for assessment of the effectiveness of given surgical procedure in achieving the local control of a neoplasm and the adequacy of tumor removal. It is defined by the tissue plane through which the dissection has been done and the actual or potential neoplastic tissue which has been left outside the boundary of a resected specimen within the patient. There are four types of surgical margins: intracapsular or intralesional, marginal, wide, and radical.
tumor_classification
ncit:C174459
The classification of a tumor based primarily on histopathological characteristics.
Slot Icons:Required

StemCellTransplant 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_sct
integer
ncit:C168853
Age of subject (in days) at the time of stem cell transplantation.
sct_type
ncit:C168864
Type of stem-cell transplantation the subject received.
sct_source
ncit:C168870
The source of the stem cells for the stem cell transplant.
sct_donor_relationship
ncit:C168869
The biological relationship between the stem cell donor and the recipients.
hla_match
ncit:C169009
A process in which blood or tissue samples are analyzed to determine their human leukocyte antigen (HLA) profiles so that transplant materials can be transferred into a patient with the same or similar profile.
number_hla
decimal
ncit:C173301
The number of human leukocyte antigens that were evaluated.
number_matches
decimal
ncit:C173302
The number of human leukocyte antigens that matched between the donor and the recipient.
hla_a_result
ncit:C168923
The extent of HLA-A matching between the donor and the recipient.
hla_b_result
ncit:C168924
The extent of HLA-B matching between the donor and the recipient.
hla_c_result
ncit:C168925
The extent of HLA-C matching between the donor and the recipient.
hla_drb1_result
ncit:C168926
The extent of HLA-DRB1 matching between the donor and the recipient.
hla_dq_result
ncit:C168927
The extent of HLA-DQ matching between the donor and the recipient.
sct_conditioning_type
ncit:C169014
Type of conditioning the subject received prior to stem-cell transplantation.
sct_tbi
ncit:C15350
A procedure involving irradiation of the whole body.
sct_cd34_coll
decimal
ncit:C175036
The determination of the amount of CD34 expressing stem cells present in a sample.
Slot Icons:Required

TransfusionMedicineProcedure 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_tmp_start
integer
ncit:C172697
Age of subject (in days) at the start of the transfusion procedure.
tmp_type
ncit:C173057
An infusion or replacement of blood components.
tmp_product
ncit:C173287
The type of product intended for transfusion.
tmp_product_type
ncit:C185655
The type of processing that is used on the transfusion product.
tmp_number_units
decimal
ncit:C185656
The number of units transfused into an individual.
Slot Icons:Required

RadiationTherapy 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_rt_start
integer
ncit:C172695
Age of subject (in days) at the start of radiation therapy.
age_at_rt_end
integer
ncit:C172696
Age of subject (in days) at the end of radiation therapy.
rt_timing
administration_status
rt_site
ncit:C173281
The anatomic site of the radiation therapy.
rt_dose
decimal
ncit:C173282
The total radiation dose administered.
rt_unit
ncit:C18068
A unit of measurement of the dose of radiation received or absorbed.
boost_dose
decimal
ncit:C185679
The dose amount of the radiation boost.
boost
ncit:C137812
One or more extra radiation treatments targeted at the tumor bed, given after the regular sessions of radiation are complete.
energy_type
ncit:C15313
Patient required additional radiation therapy.
num_fraction
decimal
ncit:C175034
The number of divided radiation doses received per day.
rt_laterality
ncit:C175523
tumor_classification
ncit:C174459
The classification of a tumor based primarily on histopathological characteristics.
Slot Icons:Required

TotalDose 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_total_dose_start
integer
ncit:C172698
Age of subject (in days) at the start of the total dose calculation.
age_at_total_dose_end
integer
ncit:C172686
Age of subject (in days) at the end of the total dose calculation.
cycle_number
integer
ncit:C166208
The number of the individual chemotherapeutic cycle.
administration_status
route
ncit:C38114
antineoplastic_agent
ncit:C274
A drug used to treat cancer.
number_doses
decimal
ncit:C173293
The total number of doses administered to the patient over the defined period of time.
total_dose_administered
decimal
ncit:C94394
In medicine, the total amount of a drug or radiation given to a patient over time; for example, the total dose of radiation given in a series of radiation treatments.
total_dose_intended
decimal
ncit:C173294
The total amount of the medication intended to be administered to the patient over the defined period of time.
total_dose_units
ncit:C173295
route_detail
ncit:C38114
Slot Icons:Required

ProtocolTreatmentModifications 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_mod
integer
ncit:C185630
mod_type
ncit:C185632
The kind of modification.
mod_rationale
ncit:C185636
The rationale for why an entity or event is changed.
mod_reason
ncit:C93529
The rationale for why an entity or event is changed.
toxicity_detail
ncit:C185693
Information about the conditions surrounding the toxicity.
toxicity_immune
ncit:C63814
Toxicity that impairs or damages the immune system.
toxicity_infusion
ncit:C185649
Toxicity related to an infusion.
original_agent
ncit:C185650
The first agent planned for a therapy.
sub_agent
ncit:C185634
A medication was substituted with another.
Slot Icons:Required

CellularImmunotherapy 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_cimt_start
integer
ncit:C173195
Age of subject (in days) at the start of the cellular immunotherapy.
cimt_type
ncit:C173289
Slot Icons:Required

NonProtocolTherapy 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
npt_timing
ncit:C175038
A description of the timing of when the non-protocol therapy was received.
npt_type
ncit:C175041
npt_sct_type
ncit:C186477
Slot Icons:Required
Monitoring

SubjectResponse 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_response
integer
ncit:C168856
Age of subject (in days) when the response assessment was made.
response_method
ncit:C178148
The method used to assess the response to therapy.
response_category
ncit:C173306
The category used to assess the response to therapy.
response_criteria
response_criteria_version
string
response
ncit:C50995
Status of the disease treated with radiation therapy at the time of the record.
bm_pct_blasts_at_response
decimal
ncit:C168959
The percent of cells that were blasts in the subject's bone marrow used to make the response assessment.
bm_analysis_method_at_response
ncit:C168960
The modality used to determine the bone marrow percent blasts.
anc_at_response
decimal
ncit:C168961
The absolute neutrophil count used to make the response assessment.
anc_threshold_at_response
ncit:C168962
Subject exceeded an absolute neutrophil count threshold of >= 500 (ANC/mm3) at the time of the response assessment.
platelet_count_at_response
decimal
ncit:C168963
The platelet count used to make the response assessment.
platelet_threshold_at_response
ncit:C168964
Subject exceeded a platelet count threshold of >=50,000 (platelets/mm3) at the time of the response assessment.
interim_response
ncit:C185657
An evaluation prior to the completion of therapy that the individual is responding to therapy.
necrosis
necrosis_pct
decimal
nodular_splenic
ncit:C185322
A finding indicating that Hodgkin lymphoma has spread to the spleen focally and there is associated involvement of the hilar lymph nodes.
palpable_nodes
ncit:C185660
The lymph nodes are felt on palpation.
symptoms
ncit:C25269
Exhibiting the symptoms of a particular disease.
tx_prior_response
Slot Icons:Required

MinimalResidualDisease 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_mrd_assessment
integer
ncit:C168855
Age of subject (in days) at assessment of minimal residual disease.
mrd_method
ncit:C168933
Modality used to determine minimal residual disease.
flow_cytometry_type
ncit:C173732
mrd_result
string
ncit:C124433
mrd_result_numeric
decimal
ncit:C168951
mrd_result_unit
ncit:C173304
mrd_sensitivity
decimal
ncit:C168957
Sensitivity of modality used to determine minimal residual disease.
mrd_sample_source
ncit:C168958
Source of sample used for minimal residual disease assessment.
mrd_molecular_markers
ncit:C168895
A one or more molecular characteristics that are used as a biomarker for minimal residual disease.
Slot Icons:Required

SecondaryMalignantNeoplasm 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_smn
integer
ncit:C168860
Age of subject (in days) at the diagnosis of the secondary malignant neoplasm.
smn_morph_sno
string
smn_morph_txt
string
smn_site
smn_top_sno
string
smn_top_txt
string
smn_type
smn_yn
smn_morph_icdo
string
ncit:C168862
smn_top_icdo
string
ncit:C168863
smn_field
ncit:C175044
The location of the second malignant neoplasm related to the prior radiation field.
Slot Icons:Required

AdverseEvent 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_ae
integer
ncit:C172677
Age of subject (in days) at the onset of the adverse event.
age_at_ae_resolved
enum
ncit:C175043
Age of subject (in days) at adverse event resolution.
adverse_event
ncit:C41331
An unexpected medical problem that happens during treatment with a drug or other therapy. Adverse effects do not have to be caused by the drug or therapy, and they may be mild, moderate, or severe.
ae_code
string
ncit:C173313
The code of the adverse event.
ae_system
ncit:C168872
The name of the system used to grade the adverse events.
ae_system_version
string
ncit:C173314
The version of the adverse event grading system.
ae_grade
ncit:C166200
A numeric value corresponding to the degree of severity of an adverse event.
ae_attribution
ncit:C41358
A specific identifiable level (defined qualitatively or quantitatively) of probability of adverse event being caused or associated with the product or procedure administration to a patient.
ae_outcome
ncit:C49489
A condition or event that is attributed to the adverse event and is the result or conclusion of the adverse event.
ae_icu
ncit:C173316
An indication of whether the subject was admitted to the intensive care unit.
ae_medication
ncit:C173317
The medication related to the adverse event.
ae_intervention
ncit:C173318
An intervention was administered to treat the adverse event.
ae_med_intervention_detail
ncit:C173319
The intervention or medication detail of the adverse event.
ae_pathogen
ncit:C185665
The pathogen identified as the agent causing the adverse event.
ae_pathogen_confirmation
ncit:C168955
An indication that the reported pathogen was confirmed or suspected as the cause of an infection.
gvhd_acuity
ncit:C168861
The assessed level of seriousness assigned to the graft versus host disease.
gvhd_organ
ncit:C168883
The organs involved in the graft vs host disease.
Slot Icons:Required

GrowingTeratomaSyndrome 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
timings_submitter_id
Timing
age_at_gts
integer
ncit:C177375
gts_treatment
ncit:C177376
The therapy chosen to treat Growing Teratoma Syndrome.
Slot Icons:Required

LateEffects 0..*

Diagram
SlotRangeSlot URIDescription
subjects_submitter_id
Subject
age_at_le_eval
integer
ncit:C185670
Age of subject (in days) when the late effect evaluation was performed.
le
ncit:C4808
Any symptom or condition which is a result of a medical intervention but arises months or years after it.
le_detail
ncit:C185686
An in-depth explanation of a health problem that occurs months or years after a disease is diagnosed or after treatment has ended.
le_sub_detail
ncit:C186352
An added in-depth or explanation of a health problem that occurs months or years after a disease is diagnosed or after treatment has ended.
le_severity_grade
ncit:C186476
A severity grade assigned to the late effects.
le_ctcae_version
string
ncit:C185691
The version of the Common Terminology Criteria for Adverse Events (CTCAE) Terminology.
Slot Icons:Required

AbEnum

AdministrationStatusEnum

AdverseEventEnum

AeAttributionEnum

AeExpectedEnum

AeGradeEnum

AeMedInterventionDetailEnum

AeOutcomeEnum

AePathogenConfirmationEnum

AePathogenEnum

AePathogenStatusEnum

AeSystemEnum

AnaplasiaEnum

AnaplasiaExtentEnum

AntineoplasticAgentEnum

AssistedConceptionEnum

BiopsyTypeEnum

BmAnalysisMethodAtResponseEnum

CauseOfDeathDetailEnum

CauseOfDeathEnum

CauseOfDeathRankingEnum

CensorStatusEnum

CimtTypeEnum

CnsDiseaseStatusEnum

ConsortiumEnum

CopyNumberStatusEnum

CourseEnum

CytodifferentiationEnum

CytologySpecTypeEnum

DataContributorIdEnum

DeauvilleScoreEnum

DepthEnum

DetectionMethodEnum

DiamDim1TypeEnum

DiamDim2TypeEnum

DiamDim3TypeEnum

DiseasePhaseEnum

DiseaseSiteEnum

DnaIndexEnum

EExtensionSiteEnum

EnergyTypeEnum

EnrolledStatusEnum

EthnicityEnum

FabTypeEnum

FlowCytometryTypeEnum

FunctionCategoryEnum

FunctionResultMeasurementEnum

FunctionResultUnitEnum

FunctionTestEnum

GtsTreatmentEnum

GvhdAcuityEnum

GvhdOrganEnum

HistAssessmentReviewEnum

HistologyEnum

HistologyGradeEnum

HistologyInpcEnum

HistologyResultUnitEnum

HlaBResultEnum

HlaCResultEnum

HlaDqResultEnum

HlaDrb1ResultEnum

HlaMatchEnum

HlaResultEnum

IgcccRiskGroupEnum

IhcResultUnitEnum

IhcSpecTypeEnum

IhcTestEnum

ImagingMethodEnum

ImagingResultEnum

InitialTreatmentCategoryEnum

InterimResponseEnum

IrsGroupEnum

KarnofskyEnum

KaryotypeStatusEnum

LabCatEnum

LabMethodEnum

LabResultUnitEnum

LabSeqMethodEnum

LabSpecTypeEnum

LabTestEnum

LanskyEnum

LeDetailEnum

LeEnum

LeSeverityGradeEnum

LeSubDetailEnum

LesionAssessmentReviewEnum

LesionClassificationEnum

LesionDetectionMethodEnum

LesionLateralityEnum

LesionResponseEnum

LesionSiteEnum

LkssEnum

MagicRiskGroupEnum

MalignantCellsEnum

MarginsEnum

MedicalHistoryCategoryEnum

MedicalHistoryEnum

MedicalHistoryStatusEnum

MedicationReasonEnum

MitosesEnum

MkiEnum

ModRationaleEnum

ModReasonEnum

ModTypeEnum

MolecularAbnormalityEnum

MolecularAbnormalityResultEnum

MolecularAnalysisMethodEnum

MrdMethodEnum

MrdMolecularMarkersEnum

MrdResultUnitEnum

MrdSampleSourceEnum

MyeloidSarcomaSiteEnum

NecrosisEnum

NodalClinicalEnum

NodalPathologyEnum

NodalSiteEnum

NptSctTypeEnum

NptTimingEnum

NptTypeEnum

NumberNodesEnum

OffTypeEnum

OriginalAgentEnum

ProcedureExtentEnum

ProcedureLateralityEnum

ProcedurePurposeEnum

ProcedureSiteEnum

ProcedureTreatmentTimingEnum

ProcedureTypeEnum

RaceEnum

ReasonOffEnum

RelativeEnum

ResponseCategoryEnum

ResponseCriteriaEnum

ResponseEnum

ResponseMethodEnum

RouteDetailEnum

RouteEnum

RtLateralityEnum

RtSiteEnum

RtTimingEnum

RtUnitEnum

SctConditioningTypeEnum

SctDonorRelationshipEnum

SctSourceEnum

SctTypeEnum

SexEnum

SmnFieldEnum

SmnSiteEnum

SmnTypeEnum

SomaticMalignancyTypeEnum

StageEnum

StageSystemEnum

StudyIdEnum

StudyPhaseEnum

StudyTypeEnum

SubAgentEnum

TimingTypeEnum

TmpProductEnum

TmpProductTypeEnum

TmpTypeEnum

TnmFindingEnum

TotalDoseUnitsEnum

ToxicityDetailEnum

TreatmentArmEnum

TrmTypeEnum

TumorClassificationEnum

TumorDetectionMethodEnum

TumorLateralityEnum

TumorSiteEnum

TumorSizeEnum

TumorStateEnum

TxPriorResponseEnum

VariantTypeEnum

VitalsResultUnitEnum

VitalsTestEnum

WhoAmlEnum

YesNoEnum


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